Bioinformatics Virtual Coordination Network

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Recorded lessons from the Bioinformatics Virtual Coordination Network

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Metagenomic pathogen detection using MMseqs2, Plass, and Linclust

Metagenomic pathogen detection using MMseqs2, Plass, and Linclust Bioinformatics Virtual Coordination Network

3.1K views - 4 years ago

Galaxy for microbiome via ASaiM story - From a local project to a global effort

Galaxy for microbiome via ASaiM story - From a local project to a global effort Bioinformatics Virtual Coordination Network

626 views - 4 years ago

Unifying the microbial known and unknown coding sequence space -

Unifying the microbial known and unknown coding sequence space - Bioinformatics Virtual Coordination Network

1.1K views - 4 years ago

EukHeist: Scalable and automated discovery of eukaryotic genomes from a global dataset

EukHeist: Scalable and automated discovery of eukaryotic genomes from a global dataset Bioinformatics Virtual Coordination Network

421 views - 4 years ago

Tweedieverse - A Single Home for Microbiome Multi-omics Differential Analysis

Tweedieverse - A Single Home for Microbiome Multi-omics Differential Analysis Bioinformatics Virtual Coordination Network

862 views - 4 years ago

Paleogenomic landscape of pathogens in Pre- and Contact individuals from the Americas

Paleogenomic landscape of pathogens in Pre- and Contact individuals from the Americas Bioinformatics Virtual Coordination Network

255 views - 4 years ago

Introducing Miriam Bravo López - Featured Speaker for the BVCN Virtual Conference 2021

Introducing Miriam Bravo López - Featured Speaker for the BVCN Virtual Conference 2021 Bioinformatics Virtual Coordination Network

113 views - 5 years ago

Introducing Dr. Martin Steinegger - Featured Speaker for the BVCN Virtual Conference 2021

Introducing Dr. Martin Steinegger - Featured Speaker for the BVCN Virtual Conference 2021 Bioinformatics Virtual Coordination Network

385 views - 5 years ago

Introducing Dr. Bérénice Batut - Featured Speaker for the BVCN Virtual Conference 2021

Introducing Dr. Bérénice Batut - Featured Speaker for the BVCN Virtual Conference 2021 Bioinformatics Virtual Coordination Network

171 views - 5 years ago

Introducing Dr. Harriet Alexander - Featured Speaker for the BVCN Virtual Conference 2021

Introducing Dr. Harriet Alexander - Featured Speaker for the BVCN Virtual Conference 2021 Bioinformatics Virtual Coordination Network

152 views - 5 years ago

Introducing Chiara Vanni - Featured Speaker for the BVCN Virtual Conference 2021

Introducing Chiara Vanni - Featured Speaker for the BVCN Virtual Conference 2021 Bioinformatics Virtual Coordination Network

431 views - 5 years ago

Introducing Dr. Himel Mallick - Featured Speaker for the BVCN Virtual Conference 2021

Introducing Dr. Himel Mallick - Featured Speaker for the BVCN Virtual Conference 2021 Bioinformatics Virtual Coordination Network

373 views - 5 years ago

Topic: Functional Annotation Lesson 8 Hands-on demonstration of Pseudo-Finder

Topic: Functional Annotation Lesson 8 Hands-on demonstration of Pseudo-Finder Bioinformatics Virtual Coordination Network

807 views - 5 years ago

Topic: Functional Annotation Lesson 8 Pseudogene prediction with Pseudo-Finder

Topic: Functional Annotation Lesson 8 Pseudogene prediction with Pseudo-Finder Bioinformatics Virtual Coordination Network

741 views - 5 years ago

Topic: Functional Annotation Lesson 7 Hands-on with standalone antiSMASH

Topic: Functional Annotation Lesson 7 Hands-on with standalone antiSMASH Bioinformatics Virtual Coordination Network

1.4K views - 5 years ago

Topic: Functional Annotation Lesson 7 Predicting Secondary Metabolites with AntiSMASH

Topic: Functional Annotation Lesson 7 Predicting Secondary Metabolites with AntiSMASH Bioinformatics Virtual Coordination Network

5.4K views - 5 years ago

Topic: Python Lesson 9 Ordination Part 1 - Jaccard & Bray-Curtis

Topic: Python Lesson 9 Ordination Part 1 - Jaccard & Bray-Curtis Bioinformatics Virtual Coordination Network

624 views - 5 years ago

Topic: Metagenomics Lesson 9 Hands-on with CheckM

Topic: Metagenomics Lesson 9 Hands-on with CheckM Bioinformatics Virtual Coordination Network

1.6K views - 5 years ago

Topic: Metagenomics Lesson 9 Bin Evaluation

Topic: Metagenomics Lesson 9 Bin Evaluation Bioinformatics Virtual Coordination Network

468 views - 5 years ago

Topic: Transcriptomics Lesson 4

Topic: Transcriptomics Lesson 4 Bioinformatics Virtual Coordination Network

402 views - 5 years ago

Topic: Population Genetics & Genomic Comparison Lesson 3 Phylogenetically Structured Data

Topic: Population Genetics & Genomic Comparison Lesson 3 Phylogenetically Structured Data Bioinformatics Virtual Coordination Network

200 views - 5 years ago

Topic: R Lesson 8b.2 & Amplicons 5b.2 - Completion of the Ordination Part 2 hands-on tutorial

Topic: R Lesson 8b.2 & Amplicons 5b.2 - Completion of the Ordination Part 2 hands-on tutorial Bioinformatics Virtual Coordination Network

157 views - 5 years ago

Topic: R Lesson 8b.1 & Amplicons Lesson 5b.1 - Ordination Part 2

Topic: R Lesson 8b.1 & Amplicons Lesson 5b.1 - Ordination Part 2 Bioinformatics Virtual Coordination Network

207 views - 5 years ago

Topic: Python Lesson 8 Pandas Part 2

Topic: Python Lesson 8 Pandas Part 2 Bioinformatics Virtual Coordination Network

66 views - 5 years ago

Topic: R Lesson 8a & Topic: Amplicon Lesson 5a Ordinations Part 1

Topic: R Lesson 8a & Topic: Amplicon Lesson 5a Ordinations Part 1 Bioinformatics Virtual Coordination Network

412 views - 5 years ago

Topic: Python Lesson 7 Introduction to Pandas dataframes

Topic: Python Lesson 7 Introduction to Pandas dataframes Bioinformatics Virtual Coordination Network

63 views - 5 years ago

Topic: Amplicon Lesson 4 Preparing Output from Amplicon Pipelines for Analysis

Topic: Amplicon Lesson 4 Preparing Output from Amplicon Pipelines for Analysis Bioinformatics Virtual Coordination Network

494 views - 5 years ago

Topic: Transcriptomics Lesson 3 Tutorial htseq-count demonstration

Topic: Transcriptomics Lesson 3 Tutorial htseq-count demonstration Bioinformatics Virtual Coordination Network

2.7K views - 5 years ago

Topic: Transcpritomics Lesson 3 - Read counts with htseq-count

Topic: Transcpritomics Lesson 3 - Read counts with htseq-count Bioinformatics Virtual Coordination Network

2K views - 5 years ago

Topic: Amplicons Lesson 3b - RStudio + DADA2 (using DECIPHER for taxonomic classification)

Topic: Amplicons Lesson 3b - RStudio + DADA2 (using DECIPHER for taxonomic classification) Bioinformatics Virtual Coordination Network

3.1K views - 5 years ago

Topic: Network Science Lesson 1.4 Extended Local Similarity Analysis Method for Time-Series

Topic: Network Science Lesson 1.4 Extended Local Similarity Analysis Method for Time-Series Bioinformatics Virtual Coordination Network

398 views - 5 years ago

Topic: Python Lesson 6 Live Coding Demo 3

Topic: Python Lesson 6 Live Coding Demo 3 Bioinformatics Virtual Coordination Network

76 views - 5 years ago

Topic: R Lesson 7 Part 2 - Correlations and linear models

Topic: R Lesson 7 Part 2 - Correlations and linear models Bioinformatics Virtual Coordination Network

86 views - 5 years ago

Topic: Metagenomics Lesson 6 Binning tool Demonstration

Topic: Metagenomics Lesson 6 Binning tool Demonstration Bioinformatics Virtual Coordination Network

1.2K views - 5 years ago

Topic: Metagenomics Lesson 6 - Binning Metagenome-assembled genomes

Topic: Metagenomics Lesson 6 - Binning Metagenome-assembled genomes Bioinformatics Virtual Coordination Network

2.3K views - 5 years ago

Topic: R Lesson 7 Part 1 Correlations and linear models

Topic: R Lesson 7 Part 1 Correlations and linear models Bioinformatics Virtual Coordination Network

144 views - 5 years ago

Topic: Amplicons - Lesson3a Running DADA2 within QIIME2

Topic: Amplicons - Lesson3a Running DADA2 within QIIME2 Bioinformatics Virtual Coordination Network

2.3K views - 5 years ago

Topic: Functional Annotation Lesson 6 Hands-on Tutorial with KEGG-Decoder

Topic: Functional Annotation Lesson 6 Hands-on Tutorial with KEGG-Decoder Bioinformatics Virtual Coordination Network

1.5K views - 5 years ago

Topic: Functional Annotation Lesson 6 - KEGG

Topic: Functional Annotation Lesson 6 - KEGG Bioinformatics Virtual Coordination Network

6.5K views - 5 years ago

Topic: Python Lesson 5 Live Code Demo

Topic: Python Lesson 5 Live Code Demo Bioinformatics Virtual Coordination Network

58 views - 5 years ago

Topic: Pop Gene & Comparative Genomics - Lesson 2 Brief Introduction to the McDonald-Kreitman Test

Topic: Pop Gene & Comparative Genomics - Lesson 2 Brief Introduction to the McDonald-Kreitman Test Bioinformatics Virtual Coordination Network

720 views - 5 years ago

Topic: Network Science Introduction to random networks

Topic: Network Science Introduction to random networks Bioinformatics Virtual Coordination Network

127 views - 5 years ago

Topic: Amplicon - Lesson 3 Prerequisite - QIIME2 on CyVerse

Topic: Amplicon - Lesson 3 Prerequisite - QIIME2 on CyVerse Bioinformatics Virtual Coordination Network

235 views - 5 years ago

Topic: Metagenomics Lesson 5 Demo 1

Topic: Metagenomics Lesson 5 Demo 1 Bioinformatics Virtual Coordination Network

363 views - 5 years ago

Topic: Metagenomics Lesson 5 - Assembly

Topic: Metagenomics Lesson 5 - Assembly Bioinformatics Virtual Coordination Network

684 views - 5 years ago

Topic: R Lesson 6 - Plotting bar plots in R

Topic: R Lesson 6 - Plotting bar plots in R Bioinformatics Virtual Coordination Network

215 views - 5 years ago

Topic: Python Lesson 4 Live Demo

Topic: Python Lesson 4 Live Demo Bioinformatics Virtual Coordination Network

86 views - 5 years ago

Topic: Network Science Time-Lagged Time-Series

Topic: Network Science Time-Lagged Time-Series Bioinformatics Virtual Coordination Network

165 views - 5 years ago

Topic: Population Genetics Lesson 1 Tutorial - Introduction to PAML

Topic: Population Genetics Lesson 1 Tutorial - Introduction to PAML Bioinformatics Virtual Coordination Network

2.9K views - 5 years ago

Topic: Population Genetic Lesson 1

Topic: Population Genetic Lesson 1 Bioinformatics Virtual Coordination Network

534 views - 5 years ago

Topic: Python Lesson 3 Hands-on Part 2 - Dictionaries

Topic: Python Lesson 3 Hands-on Part 2 - Dictionaries Bioinformatics Virtual Coordination Network

59 views - 5 years ago

Topic: Python Lesson 3 Hands-on Part 1 Strings and List

Topic: Python Lesson 3 Hands-on Part 1 Strings and List Bioinformatics Virtual Coordination Network

110 views - 5 years ago

Topic: Functional Annotation Lesson 5 Tutorial 2

Topic: Functional Annotation Lesson 5 Tutorial 2 Bioinformatics Virtual Coordination Network

185 views - 5 years ago

Topic: Functional Annotation Lesson 5 Tutorial 1

Topic: Functional Annotation Lesson 5 Tutorial 1 Bioinformatics Virtual Coordination Network

260 views - 5 years ago

Topic: Basic Unix - Introduction to Conda

Topic: Basic Unix - Introduction to Conda Bioinformatics Virtual Coordination Network

199 views - 5 years ago

Topic: Functional Annotation Lesson 5

Topic: Functional Annotation Lesson 5 Bioinformatics Virtual Coordination Network

461 views - 5 years ago

Topic: R Lesson 5 - Introduction to Plotting

Topic: R Lesson 5 - Introduction to Plotting Bioinformatics Virtual Coordination Network

178 views - 5 years ago

Topic: Network Science Introduction to clustering with igraph.

Topic: Network Science Introduction to clustering with igraph. Bioinformatics Virtual Coordination Network

415 views - 5 years ago

Topic: R Lesson 4

Topic: R Lesson 4 Bioinformatics Virtual Coordination Network

195 views - 5 years ago

Topic: Metagenomics Lesson 4

Topic: Metagenomics Lesson 4 Bioinformatics Virtual Coordination Network

390 views - 5 years ago